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    MK473403 Hyalorbilia berberidis


    MycoMap


    • Accession: MK473403
      Version: MK473403.1
      Locus: MK473403
      Other Seq IDs: gb|MK473403.1|,gi|1772374926

      Source: Hyalorbilia berberidis
      Organism: Hyalorbilia berberidis

      Taxonomy: Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Orbiliomycetes; Orbiliales; Orbiliaceae; Hyalorbilia

      Reference # 1 Position: 1..2158
      Reference # 1 Authors: Baral,H.-O. , Weber,E. , Marson,G.
      Reference # 1 Title: Monograph of Orbiliomycetes (Ascomycota)
      Reference # 1 Journal: Unpublished

      Reference # 2 Position: 1..2158
      Reference # 2 Authors: Hermant,S.
      Reference # 2 Title: Direct Submission
      Reference # 2 Journal: Submitted (30-JAN-2019) Musee National d'Histoire Naturelle, 25 rue Muenster, Luxembourg 2160, Luxembourg

      Comment: ##Assembly-Data-START## ; Assembly Method :: Geneious v. 7.1.4 ; Sequencing Technology :: Sanger dideoxy sequencing ; ##Assembly-Data-END##

      Feature - Source:

      Location: 1..2158
      Organism: Hyalorbilia berberidis
      Mol_type: genomic DNA
      Isolation_source: branch & basidiocarp, wood
      Host: Fagus sylvatica
      Specimen_voucher: F.B. 20180928PP01
      Db_xref: taxon:2663489
      Dev_stage: apothecia
      Country: Belgium: Provenciaal Domein Prinsenpark, 5.4 km SSW of Retie, Dessel, Turnhout, Antwerpen (BE-VAN)
      Lat_lon: 51.2258 N 5.0442 E
      Altitude: 27 m
      Collection_date: 28-Sep-2018
      Collected_by: F. Bartholomeeusen
      Identified_by: F. Bartholomeeusen & H.O. Baral
      Feature - misc_RNA: {"location":"<1..>2158","note":"contains small subunit ribosomal RNA, internal transcribed spacer 1, 5.8S ribosomal RNA, internal transcribed spacer 2, and large subunit ribosomal RNA"}
      1 TCTTAGTTGG     TGGAGTGATT     TGTCTGCTTA     ATTGCGATAA     CGAACGAGAC     CTTAACCTGC    
      61 TAAATAGCCC     GTCGAGCTTC     CGCTCGGCGC     CGGCTTCTTA     GAGGGACTAT     CGGCTCAAGC    
      121 CGATGGAAGT     TTGAGGCAAT     AACAGGTCTG     TGATGCCCTT     AGATGTTCTG     GGCCGCACGC    
      181 GCGCTACACT     GACGGGGCCA     ACGAGTATAA     TCCTTGACCG     AAAGGTCTGG     GTAATCTTGT    
      241 TAAACCCCGT     CGTGCTGGGG     ATAGGGCATT     GCAATTATTG     CCCTTCAACG     AGGAATTCCT    
      301 AGTAAGCGCA     AGTCATCAGC     TTGCGTTGAT     TACGTCCCTG     CCCTTTGTAC     ACACCGCCCG    
      361 TCGCTACTAC     CGATTGAATG     GCTCAGTGAG     GCCTTCGGAT     TGGCTCAGGG     AGGGGGGCAA    
      421 CCCCCACCCA     GAGCCGAGAA     GTTGGTCAAA     CTTGGTCATT     TAGAGGAAGT     AAAAGTCGTA    
      481 ACAAGGTTTC     CGTAGGTGAA     CCTGCGGAAG     GATCATTACC     TAGCTTGGGC     CCCTCAAGGC    
      541 CTTCTGCGGC     GGCGCTCGCG     CCGCCTGCAG     TTAAACCCTT     TGTGAAAACC     CTTGTTGCTT    
      601 CGGCAGCGCC     TCCCCGCCCC     GGCGGGGAGG     GTCAGCCTGC     CGACGGCACC     CGGAAACTCA    
      661 TTTTTGAAAC     AAGTACTGTC     TGAAATTATA     GTCGAATGAC     TGTTAAAACT     TTCAACAACG    
      721 GATCTCTTGG     TTCCCGCATC     GATGAAGAAC     GCAGCGAAAC     GCGATAGTTA     ATGTGAATTG    
      781 CAGAATTCAG     TGAATCATCG     AGTCTTTGAA     CGCACATTGC     GCCTTCCGGT     ATTCCGGGAG    
      841 GCACGTCCGT     TTGAGCGTCA     GTGAACACCC     TCCGGCCCCC     GGTTTTTGCG     AACCGGCGGG    
      901 CGCGGGCCCA     TGGCGTGGGG     ATAGAGGCCA     CCGCGTTTCG     GCGCGTCGAG     GCATTCCCCC    
      961 GCTTAAACGC     GGAGAAAAGC     TAGCGGGCAG     GTGCCCCCAT     CGCGATGACT     CGTAGATTTA    
      1021 TCTTCCGTCG     TCCAGCGTGA     GGGAAGCCGC     CGCCTTAAAA     AGAGGGGGAG     CCCCCGGGCG    
      1081 CCCCCCCAGA     ATCTTGACCT     CAGATCGGAC     GAGGATACCC     GCTGAACTTA     AGCATATCAA    
      1141 TAAGCGGAGG     AAAAGAAACC     AACAGGGATT     GCCTCAGTAG     CGGCGAGTGA     AGCGGCAAGA    
      1201 GCTCAGATTT     GAAATCCGGC     GCGTTTACGC     TCCCGAGTTG     TAATCTGGAG     AGGATGCCAC    
      1261 GGCGAGGTCG     GCCGCCCAAG     TTCCTTGGAA     CAGGACGCCT     GAGAGGGTGA     GAGCCCCGTA    
      1321 CCCGGCGGCC     CGGCCTAGCC     ATGTGTGGCT     CCTTCGACGA     GTCGAGTTGT     TTGGGAATGC    
      1381 AGCTCAAACT     TGGTGGTAAA     TTCCATCTAA     AGCTAAATAC     CGGCGGGAGA     CCGATAGCGC    
      1441 ACAAGTAGAG     TGATCGAAAG     ATGAAAAGCA     CTTTGAAAAG     AGAGTTAAAA     AGTACGTGAA    
      1501 ATTGTTGAAA     GGGAAGCGCT     TGCCATCAGA     ACGGCGGCCG     GTCGATCAAC     GTCCCTTCTG    
      1561 GTTCGTGCAC     TCGGCCGGCA     TTGCCTGCCA     GCATCGGTTG     CAGCGGTGGG     AGAAAGGCGG    
      1621 CGGGAACGTG     GCTCCCCTCG     GGGAGTGTTA     TAGCCCGCCG     TGTCATGCCG     CCTGCCGCGA    
      1681 CCGAGGCCCG     CGGATTCGTC     CAAGGATGCT     GGCCTAATGG     TTGTAAGCGA     CCCGTCTTGA    
      1741 AACACGGACC     AAGGAGTCTA     ACATCTACGC     GAGTGTTCGG     GTGGAAAACC     CGCGCGCGGA    
      1801 ATGAAAGTGA     ACGGAGGTGG     GAGCCTTTAC     CGGTGCACCA     TCGACCGATC     CTGATGTCTT    
      1861 CGGATGGATT     TGAGTAGGAG     CGTAGCTGTT     GGGACCCGAA     AGATGGTGAA     CTATGCCTGA    
      1921 ATAGGGTGAA     GCCAGAGGAA     ACTCTGGTGG     AGGCTCGCAG     CGGTTCTGAC     GTGCAAATCG    
      1981 ATCGTCAAAT     TTGGGTATAG     GGGCGAAAGA     CTAATCGAAC     CATCTAGTAG     CTGGTTCCTG    
      2041 CCGAAGTTTC     CCTCAGGATA     GCAGTGACGA     GTTTTCAGTT     TTATGAGGTA     AAGCGAATGA    
      2101 TTAGAGGCCT     TGGGGTTGAA     ACAACCTTAA     CCTATTCTCA     AACTTTAAAT     ATGTAAGA    
      Location Needed: No
      MycoMap Location: Turnhout, Antwerp, Belgium, Antwerp, BELGIUM
      Collection Date: 09/28/2018 MycoMap Species Name: Hyalorbilia berberidis Metadata Verified: No Reference Link: Secondary References: Type: No MycoPortal Link: MO Link: iNaturalist Link: Reports Link: Undescribed?: No Parent Sequence:
    Hyalorbilia berberidis voucher F.B. 20180928PP01 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence

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  • Problem Flags
    This sequence is a contaminant
    This sequence is the wrong specimen
    Low quality sequence
    Analytical Flags
    This sequence is the first record of the species from the state
    This sequence is the first record of the genotype in GenBank
    Multiple genotypes are going under this name in GenBank
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