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    KU668951 Phialocephala lagerbergii


    Stephen Russell


    • Accession: KU668951
      Version: KU668951.1
      Locus: KU668951
      Other Seq IDs: gb|KU668951.1|,gi|1059843045

      Source: Phialocephala lagerbergii
      Organism: Phialocephala lagerbergii

      Taxonomy: Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Helotiales incertae sedis; Phialocephala

      Reference # 1 Position: 1..563
      Reference # 1 Authors: Palmer,J.M. , Banik,M.T. , Jusino,M.A. , Lindner,D.L. , Edgar,R.C.
      Reference # 1 Title: Fungal ITS mock community as a spike-in control for next generation sequencing experiments
      Reference # 1 Journal: Unpublished

      Reference # 2 Position: 1..563
      Reference # 2 Authors: Palmer,J.M. , Banik,M.T. , Jusino,M.A. , Lindner,D.L. , Edgar,R.C.
      Reference # 2 Title: Direct Submission
      Reference # 2 Journal: Submitted (03-FEB-2016) CFMR, US Forest Service, 1 Gifford Pinchot Drive, Madison, WI 53726, USA

      Comment: ##Assembly-Data-START## ; Sequencing Technology :: Sanger dideoxy sequencing ; ##Assembly-Data-END##

      Feature - Source:

      Location: 1..563
      Organism: Phialocephala lagerbergii
      Mol_type: genomic DNA
      Isolation_source: rotted Picea log
      Specimen_voucher: CFMR:FP-170134
      Db_xref: taxon:91937
      Country: USA: Alaska
      Collection_date: 2004
      Collected_by: M. Banik
      Feature - misc_RNA: {"location":"381..523","product":"internal transcribed spacer 2"}

      Feature - rRNA:

      Location: 524..>563
      Product: 28S ribosomal RNA

      1 TTTCCGTAGG     TGAACCTGCG     GAAGGATCAT     TAATCAGTGG     ATCCGGCGGG     GAATCCCCTC    
      61 TCCCCCGAGA     GGGGGTCGCC     TCGCCGGGTA     GACCTCCACC     CGTGCTTACC     TACTCTTGTT    
      121 GCTTTGGCGG     GCCGTGGCCT     CCACTACGGG     CTCTGCTCGT     ACGTGCCCGC     CAGAGGACCA    
      181 AACTCTGAAT     ATTAGTGATG     TCTGAGAACT     ATTTAATAGT     TAAAACTTTC     AACAACGGAT    
      241 CTCTTGGTTC     TGGCATCGAT     GAAGAACGCA     GCGAAATGCG     ATAAGTAATG     TGAATTGCAG    
      301 AATTCAGTGA     ATCATCGAAT     CTTTGAACGC     ACATTGCGCC     CTGTGGTATT     CCGCAGGGCA    
      361 TGCCTGTTCG     AGCGTCATTT     AGACCACTCA     CGCCTGGCGT     GGTGTTGGGG     CACGCGGTTC    
      421 CGCGGCCCTC     AAAATCAGTG     GCGGCGCCGG     TAGGCCCTAA     GCGTAGTAAA     TCTCCTCGCT    
      481 ATAGGGTCCT     CTCGGTGGCT     CGCCAGAACC     CCCAACTTCT     TAAGGTTGAC     CTCGGATCAG    
      541 GTAGGGATAC     CCGCTGAACT     TAA    
      Location Needed: Yes
      Collection Date: 01/01/2004 MycoMap Species Name: Phialocephala lagerbergii Metadata Verified: No Reference Link: Secondary References: Type: No MycoPortal Link: MO Link: iNaturalist Link: Reports Link: Undescribed?: No
    Phialocephala lagerbergii voucher CFMR:FP-170134 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence

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