By
Stephen Russell
Accession: KU668951
Version: KU668951.1
Locus: KU668951
Other Seq IDs: gb|KU668951.1|,gi|1059843045
Source: Phialocephala lagerbergii
Organism: Phialocephala lagerbergii
Taxonomy: Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Helotiales incertae sedis; Phialocephala
Reference # 1 Position: 1..563
Reference # 1 Authors: Palmer,J.M. , Banik,M.T. , Jusino,M.A. , Lindner,D.L. , Edgar,R.C.
Reference # 1 Title: Fungal ITS mock community as a spike-in control for next generation sequencing experiments
Reference # 1 Journal: Unpublished
Reference # 2 Position: 1..563
Reference # 2 Authors: Palmer,J.M. , Banik,M.T. , Jusino,M.A. , Lindner,D.L. , Edgar,R.C.
Reference # 2 Title: Direct Submission
Reference # 2 Journal: Submitted (03-FEB-2016) CFMR, US Forest Service, 1 Gifford Pinchot Drive, Madison, WI 53726, USA
Comment: ##Assembly-Data-START## ; Sequencing Technology :: Sanger dideoxy sequencing ; ##Assembly-Data-END##
Feature - Source:
Location:
1..563
Organism:
Phialocephala lagerbergii
Mol_type:
genomic DNA
Isolation_source:
rotted Picea log
Specimen_voucher:
CFMR:FP-170134
Country:
USA: Alaska
Collection_date:
2004
Collected_by:
M. Banik
Feature - misc_RNA: {"location":"381..523","product":"internal transcribed spacer 2"}
Feature - rRNA:
Location: 524..>563
Product: 28S ribosomal RNA
| 1 |
TTTCCGTAGG
| TGAACCTGCG
| GAAGGATCAT
| TAATCAGTGG
| ATCCGGCGGG
| GAATCCCCTC
|
| 61 |
TCCCCCGAGA
| GGGGGTCGCC
| TCGCCGGGTA
| GACCTCCACC
| CGTGCTTACC
| TACTCTTGTT
|
| 121 |
GCTTTGGCGG
| GCCGTGGCCT
| CCACTACGGG
| CTCTGCTCGT
| ACGTGCCCGC
| CAGAGGACCA
|
| 181 |
AACTCTGAAT
| ATTAGTGATG
| TCTGAGAACT
| ATTTAATAGT
| TAAAACTTTC
| AACAACGGAT
|
| 241 |
CTCTTGGTTC
| TGGCATCGAT
| GAAGAACGCA
| GCGAAATGCG
| ATAAGTAATG
| TGAATTGCAG
|
| 301 |
AATTCAGTGA
| ATCATCGAAT
| CTTTGAACGC
| ACATTGCGCC
| CTGTGGTATT
| CCGCAGGGCA
|
| 361 |
TGCCTGTTCG
| AGCGTCATTT
| AGACCACTCA
| CGCCTGGCGT
| GGTGTTGGGG
| CACGCGGTTC
|
| 421 |
CGCGGCCCTC
| AAAATCAGTG
| GCGGCGCCGG
| TAGGCCCTAA
| GCGTAGTAAA
| TCTCCTCGCT
|
| 481 |
ATAGGGTCCT
| CTCGGTGGCT
| CGCCAGAACC
| CCCAACTTCT
| TAAGGTTGAC
| CTCGGATCAG
|
| 541 |
GTAGGGATAC
| CCGCTGAACT
| TAA
|
Location Needed: Yes
Collection Date: 01/01/2004
MycoMap Species Name: Phialocephala lagerbergii
Metadata Verified: No
Reference Link:
Secondary References:
Type: No
MycoPortal Link:
MO Link:
iNaturalist Link:
Reports Link:
Undescribed?: No
