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    KT215223 Hyalorbilia polypori


    MycoMap


    • Accession: KT215223
      Version: KT215223.1
      Locus: KT215223
      Other Seq IDs: gb|KT215223.1|,gi|1001618888

      Source: Hyalorbilia polypori
      Organism: Hyalorbilia polypori

      Taxonomy: Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Orbiliomycetes; Orbiliales; Orbiliaceae; Hyalorbilia

      Reference # 1 Position: 1..1839
      Reference # 1 Authors: Baral,H. , Weber,E. , Marson,G.
      Reference # 1 Title: Monograph or Orbiliomycetes (Ascomycetes)
      Reference # 1 Journal: Unpublished

      Reference # 2 Position: 1..1839
      Reference # 2 Authors: Hagedorn,G. , Baral,H.
      Reference # 2 Title: Direct Submission
      Reference # 2 Journal: Submitted (24-JUN-2015) Biologische Bundesanstalt f. Land- und Forstwirtschaft, Koenigin-Luise-Str. 19, Berlin 14195, Germany

      Comment: ##Assembly-Data-START## ; Assembly Method :: Sequencher v. 4 ; Sequencing Technology :: Sanger dideoxy sequencing ; ##Assembly-Data-END##

      Feature - Source:

      Location: 1..1839
      Organism: Hyalorbilia polypori
      Mol_type: genomic DNA
      Strain: CBS 117018
      Isolation_source: branch, hygric wood
      Host: Fagus sylvatica
      Specimen_voucher: H.B. 7557a
      Culture_collection: CBS:117018
      Db_xref: taxon:1798055
      Tissue_type: mycelium from ascospore isolate
      Country: Germany: Pfrondorf, Tuebingen, Baden-Wuerttemberg
      Lat_lon: 48.5400 N 9.1133 E
      Altitude: 350 m
      Collection_date: 25-Jul-2004
      Collected_by: E. Weber & H.O. Baral
      Identified_by: H.O. Baral
      Feature - misc_RNA: {"location":"<1..>1839","note":"contains 18S ribosomal RNA, internal transcribed spacer 1, 5.8S ribosomal RNA, internal transcribed spacer 2, and 28S ribosomal RNA"}
      1 CCTTAGATGT     TCTGGGCCGC     ACGCGCGCTA     CACTGACGGG     GCCAACGAGT     ATAATCCTTG    
      61 GCCGAAAGGT     CTGGGTAATC     TTGTTAAACC     CCGTCGTGCT     GGGGATAGGG     CATTGCAATT    
      121 ATTGCCCTTC     AACGAGGAAT     TCCTAGTAAG     CGCAAGTCAT     CAGCTTGCGT     TGATTACGTC    
      181 CCTGCCCTTT     GTACACACCG     CCCGTCGCTA     CTACCGATTG     AATGGCTCAG     TGAGGCCTTC    
      241 GGATTGGCCC     AGGGAGGGGG     GCAACCCCCG     CCCAGGGCCG     AGAAGTTGGT     CAAACTTGGT    
      301 CATTTAGAGG     AAGTAAAAGT     CGTAACAAGG     TTTCCTTCCA     AGGGTGTACG     CCTCCGGAAG    
      361 CCTTGGAAAG     CGTGCCTGCG     GGCAGCCGCG     GCGACTCTAA     ATAAAACCGC     GGCGCACGCT    
      421 AGTCGGCCAC     AGCGCCGGCG     ACACCGTCGA     ATTGCGGGGA     AGCCCTGAAG     GCCGCGGGAC    
      481 CGCCGGCGCT     CGAAAGAGCG     CCGCAAGGTA     ACACTCCGCG     GCACGGGGGC     AATCCGCAGC    
      541 CAAAGCCTAA     AGCCCCGAGG     GGCCACGGCG     GAGGTTCACA     GATTAAGTGG     CGGTGGGTCC    
      601 GGTAAGGGCC     TAAGATATAA     TCGGGTCCCG     GCCGAGAGGC     GGGGAAACGT     GCACAGCAAC    
      661 GTAACTGTTC     CGTAGGTGAA     CCTGCGGAAG     GATCATTAAA     AAATACTGGC     TGCCATTCGT    
      721 TTGGGAGCCG     CTGGCGGGGC     GCAAGCCCGA     ACCAGCTGTA     AACCCTTTGT     GAAAACCTTC    
      781 TTGCTTCGGC     AGCCCCTCTC     GGGGGTCAGC     CTGCCGGCGC     AGAACTAAAC     TCTTCTTTAA    
      841 AACCTTTCTG     TCAGACTTAA     AAGTCGAATT     GACTATAAAA     CTTTCAACAA     CGGATCTCTT    
      901 GGTTCCCGCA     TCGATGAAGA     ACGCAGCGAA     ACGCGATAGT     TAATGTGAAT     TGCAGAATTC    
      961 AGTGAATCAT     CGAGTCTTTG     AACGCACATT     GCGCCTCCTG     GTATTCCGGG     AGGCACGTCC    
      1021 GTTTGAGCGT     CAGCTTAACC     TTCCAAATTA     CTTTATGTGA     TTTGGGCACT     GGCGAGGGGA    
      1081 CCACCCCCCG     CTTAAACGCA     GGGAAGCTGG     CGGCACCAAC     CGCAACGACT     CATAGAATTT    
      1141 CTACCCGTCG     TAAGCCTTTG     GCGCAGCAAA     CTTCTAAAAA     TCAGGTTCTT     GCAACTTTAT    
      1201 TTTTGACCTC     AAATCGGACG     AGGATACCCG     CTGAACTTAA     GCATATCAAT     AAGCGGAGGA    
      1261 AAAGAAACCA     ACAGGGATTG     CCTCAGTAGC     GGCGAGTGAA     GCGGCAAGAG     CTCAGATTTG    
      1321 AAATCCGGCG     CGGTTCCCGC     ACCCGAGTTG     TAATCTGGAG     AGGATGCCCC     GGCGAGGCCG    
      1381 GCCGTCCAAG     TTCCTTGGAA     CAGGACGTCT     AAGAGGGTGA     GAACCCCGTA     CCCGGCGGCC    
      1441 TGCCTAGCCG     CGTGGGGCTC     CTTCGACGAG     TCGAGTTGTT     TGGGAATGCA     GCTCAAACTG    
      1501 GGTGGTAAAT     TCCATCTAAA     GCTAAATACC     GGCGGGAGAC     CGATAGCGCA     CAAGTAGAGT    
      1561 GATCGAAAGA     TGAAAAGCAC     TTTGAAAAGA     GAGTTAAAAA     GTACGTGAAA     TTGTTGAAAG    
      1621 GGAAGCGCTT     GCCATCAGAA     CCGGGGCCGG     CCGATCAGCG     ATCCTTCTGG     CTCGTGCACT    
      1681 CGGCCGGTTC     CCGTGCCAGC     ATCGGCGGCC     GCGGCGGGAC     AAAGGCGGCG     GGAACGTGGC    
      1741 TCCCCTCGGG     GAGTGTTACA     GCCCGCCGCG     TAATGCCGCC     AGCTGGCCGC     CGAGGACCGC    
      1801 GCGCAAGCAA     GGATGCTGGC     CTAATGGTCG     TAAGCGACA    
      Location Needed: No
      MycoMap Location: Pfrondorf, 72074, Tübingen, Baden-Württemberg, Germany, Baden-Württemberg, GERMANY
      Collection Date: 07/25/2004 MycoMap Species Name: Hyalorbilia polypori Metadata Verified: No Reference Link: Secondary References: Type: No MycoPortal Link: MO Link: iNaturalist Link: Reports Link: Undescribed?: No Parent Sequence:
    Orbilia polypori strain CBS 117018 voucher H.B. 7557a 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence

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  • UNITE
    Unite ID: SH497425.07FU
    Sequence Type: RepS Singleton
  • Problem Flags
    This sequence is a contaminant
    This sequence is the wrong specimen
    Low quality sequence
    Analytical Flags
    This sequence is the first record of the species from the state
    This sequence is the first record of the genotype in GenBank
    Multiple genotypes are going under this name in GenBank
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